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Room 1 Room 701 p1 Room 203
Fri 11
09:15 [_] A History of Bioinformatics (in the Year 2039)
10:45 [_] ADAM: Fast, Scalable Genomic Analysis
11:03 [_] Automated RNA-seq Differential Expression Validation
11:21 [_] New Frontiers of Genome Assembly with SPAdes 3.1
11:39 [_] SigSeeker: An Ensemble for Analysis of Epigenetic Data
11:57 [_] Galaxy as an Extensible Job Execution Platform
12:15 [_] Open Bioinformatics Foundation (OBF) update
01:00 [_] Connecting computational steps for NGS, and beyond.
01:05 [_] Updates to MISO, the open-source NGS LIMS project
01:10 [_] Running Taverna Workflows within IPython Notebook
01:15 [_] Reconstruction of ancestral genomes in presence of gene gain and loss
01:20 [_] Firehose in The Cancer Genome Atlas: Rigorous Open Science, At Scale
01:25 [_] GEPETTO Update: An Open Source Framework for Gene Prioritization
01:30 [_] NeoPipe: An Open Source Framework for Protein sequence analysis
01:35 [_] MyGene.info updates: scalable gene-centric web services with user contributions
01:40 [_] Aiding the journey from data to publication in the plant sciences
01:55 [_] Bio2RDF mobile: an app for biological semantic web databases
02:00 [_] WormGUIDES: an Interactive Informatic Developmental Atlas at Subcellular Resolution
02:18 [_] BioJS: an Open Source Standard for Biological Visualisation
02:36 [_] Biodalliance: a Fast, Extensible Genome Browser
02:54 [_] TGAC Browser: Visualisation Solutions for Big Data in the Genomic Era
03:12 [_] Explore, Analyze, and Share Genomic Data Using Integrated Genome Browser
04:00 [_] BioMart 0.9 - Introducing Tools for Data Analysis and Visualisation
04:12 [_] Biocaml: The OCaml Bioinformatics Library
04:24 [_] BioRuby and Distributed Development
04:36 [_] Biopython Project Update
04:48 [_] Shared Bioinformatics Database Within Unipro UGENE
05:00 [_] Fostering the Next Generation of Data-driven Open Science with R
05:07 [_] Tripal: an Open Source Toolkit for Building Genomic and Genetic Data Websites and Databases
05:14 [_] PLUTo: Phyloinformatic Literature Unlocking Tools
05:21 [_] A Publication Model that Aligns with the Key Open Source Software Principles
Room 1 Room 701 p1 Room 203
Sat 12
09:00 [_] Codefest 2014 Report
09:15 [_] Biomedical Research as an Open Digital Enterprise
10:45 [_] Pathview: an R/Bioconductor Package for Pathway-based Data Integration and Visualization
11:03 [_] Use of Semantically Annotated Resources in the Mobyle2 Web Framework
11:21 [_] Towards Ubiquitous OWL Computing: Simplifying Programmatic Authoring of and Querying with OWL Axioms
11:39 [_] Integrating Taverna Player into Scratchpads
11:57 [_] Small Tools for Bioinformatics
01:00 [_] Tripal: an open source toolkit for building genomic and genetic data websites and databases
01:05 [_] BioBuilds: A Model for Long Term Sustainability of Open Source Bioinformatics
02:00 [_] SEEK for Science: A Data Management Platform which Supports Open and Reproducible Science
02:18 [_] Arvados: Achieving Computational Reproducibility and Data Provenance in Large-Scale Genomic Analyses
02:36 [_] Enhancing the Galaxy Experience through Community Involvement
02:54 [_] Supporting Dynamic Community Developed Biological Pipelines
03:12 [_] 'Open' as a Strategy for Durability, Reproducibility and Scalability
04:00 [_] Panel : Reproducibility: Rewards and Challenges

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