title: Connecting computational steps for NGS, and beyond.
authors: Laurent Gautier
8430 Connecting_computational_steps_for_NGS_and_beyond.png

title: Updates to MISO, the open-source NGS LIMS project
authors: Xingdong Bian
8431 Updates_to_MISO_the_opensource_NGS_LIMS_project.png

title: Running Taverna Workflows within IPython Notebook
authors: Alan Williams / Aleksandra Pawlik (TBC)
8432 Running_Taverna_Workflows_within_IPython_Notebook.png

title: Reconstruction of ancestral genomes in presence of gene gain and loss
authors: Shuai Jiang
8433 Reconstruction_of_ancestral_genomes_in_presence_of_gene_gain_and_loss.png

title: Firehose in The Cancer Genome Atlas: Rigorous Open Science, At Scale
authors: Michael Noble
8434 Firehose_in_The_Cancer_Genome_Atlas_Rigorous_Open_Science_At_Scale.png

title: GEPETTO Update: An Open Source Framework for Gene Prioritization
authors: Hoan Nguyen
8435 GEPETTO_Update_An_Open_Source_Framework_for_Gene_Prioritization.png

title: NeoPipe: An Open Source Framework for Protein sequence analysis
authors: Hoan Nguyen
8436 NeoPipe_An_Open_Source_Framework_for_Protein_sequence_analysis.png

title: MyGene.info updates: scalable gene-centric web services with user contributions
authors: Chunlei Wu
8437 MyGeneinfo_updates_scalable_genecentric_web_services_with_user_contributions.png

title: Aiding the journey from data to publication in the plant sciences
authors: Robert Davey
8438 Aiding_the_journey_from_data_to_publication_in_the_plant_sciences.png

title: Bio2RDF mobile: an app for biological semantic web databases
authors: Maxime Déraspe
8439 Bio2RDF_mobile_an_app_for_biological_semantic_web_databases.png

title: Tripal: an open source toolkit for building genomic and genetic data websites and databases
authors: Margaret Staton
8414 Tripal_an_Open_Source_Toolkit_for_Building_Genomic_and_Genetic_Data_Websites_and_Databases.png

title: Tripal: an open source toolkit for building genomic and genetic data websites and databases
authors: Margaret Staton
8444 Tripal_an_open_source_toolkit_for_building_genomic_and_genetic_data_websites_and_databases.png

title: BioBuilds: A Model for Long Term Sustainability of Open Source Bioinformatics
authors: Chris Mueller
8440 BioBuilds_A_Model_for_Long_Term_Sustainability_of_Open_Source_Bioinformatics.png

title: A History of Bioinformatics (in the Year 2039)
authors: C. Titus Brown
8396 A_History_of_Bioinformatics_in_the_Year_2039.png

title: ADAM: Fast, Scalable Genomic Analysis
authors: Frank Austin Nothaft
8397 ADAM_Fast_Scalable_Genomic_Analysis.png

title: Automated RNA-seq Differential Expression Validation
authors: Rory Kirchner
8398 A_Framework_for_Benchmarking_RNAseq_Pipelines.png

title: New Frontiers of Genome Assembly with SPAdes 3.1
authors: Andrey Prjibelski
8399 New_Frontiers_of_Genome_Assembly_with_SPAdes_31.png

title: SigSeeker: An Ensemble for Analysis of Epigenetic Data
authors: Jens Lichtenberg
8400 SigSeeker_An_Ensemble_for_Analysis_of_Epigenetic_Data.png

title: Galaxy as an Extensible Job Execution Platform
authors: John Chilton
8401 Galaxy_as_an_Extensible_Job_Execution_Platform.png

title: Open Bioinformatics Foundation (OBF) update
authors: Hilmar Lapp
8402 Open_Bioinformatics_Foundation_OBF_update.png

title: WormGUIDES: an Interactive Informatic Developmental Atlas at Subcellular Resolution
authors: Anthony Santella
8403 WormGUIDES_an_Interactive_Informatic_Developmental_Atlas_at_Subcellular_Resolution.png

title: BioJS: an Open Source Standard for Biological Visualisation
authors: Manuel Corpas
8404 BioJS_an_Open_Source_Standard_for_Biological_Visualisation.png

title: Biodalliance: a Fast, Extensible Genome Browser
authors: Thomas Down
8405 Biodalliance_a_Fast_Extensible_Genome_Browser.png

title: TGAC Browser: Visualisation Solutions for Big Data in the Genomic Era
authors: Anil S. Thanki
8406 TGAC_Browser_Visualisation_Solutions_for_Big_Data_in_the_Genomic_Era.png

title: Explore, Analyze, and Share Genomic Data Using Integrated Genome Browser
authors: Ann Loraine
8407 Explore_Analyze_and_Share_Genomic_Data_Using_Integrated_Genome_Browser.png

title: BioMart 0.9 - Introducing Tools for Data Analysis and Visualisation
authors: Luca Pandini
8408 BioMart_09_Introducing_Tools_for_Data_Analysis_and_Visualisation.png

title: Biocaml: The OCaml Bioinformatics Library
authors: Ashish Agarwal
8409 Biocaml_The_OCaml_Bioinformatics_Library.png

title: BioRuby and Distributed Development
authors: Pjotr Prins
8410 BioRuby_and_Distributed_Development.png

title: Biopython Project Update
authors: Wibowo Arindrarto
8411 Biopython_Project_Update.png

title: Shared Bioinformatics Database Within Unipro UGENE
authors: Ivan Protsyuk
8412 Shared_Bioinformatics_Database_Within_Unipro_UGENE.png

title: Fostering the Next Generation of Data-driven Open Science with R
authors: Karthik Ram
8413 Fostering_the_Next_Generation_of_Datadriven_Open_Science_with_R.png

title: Tripal: an Open Source Toolkit for Building Genomic and Genetic Data Websites and Databases
authors: Margaret Staton
8443 Tripal_an_Open_Source_Toolkit_for_Building_Genomic_and_Genetic_Data_Websites_and_Databases.png

title: PLUTo: Phyloinformatic Literature Unlocking Tools
authors: Ross Mounce
8415 PLUTo_Phyloinformatic_Literature_Unlocking_Tools.png

title: A Publication Model that Aligns with the Key Open Source Software Principles
authors: Michael L. Markie
8416 A_Publication_Model_that_Aligns_with_the_Key_Open_Source_Software_Principles.png

title: Codefest 2014 Report
authors: Brad Chapman
8417 Codefest_2014_Report.png

title: Biomedical Research as an Open Digital Enterprise
authors: Philip Bourne
8418 Biomedical_Research_as_an_Open_Digital_Enterprise.png

title: Pathview: an R/Bioconductor Package for Pathway-based Data Integration and Visualization
authors: Weijun Luo
8419 Pathview_an_RBioconductor_Package_for_Pathwaybased_Data_Integration_and_Visualization.png

title: Use of Semantically Annotated Resources in the Mobyle2 Web Framework
authors: Hervé Ménager
8420 Use_of_Semantically_Annotated_Resources_in_the_Mobyle2_Web_Framework.png

title: Towards Ubiquitous OWL Computing: Simplifying Programmatic Authoring of and Querying with OWL Axioms
authors: Hilmar Lapp
8421 Towards_Ubiquitous_OWL_Computing_Simplifying_Programmatic_Authoring_of_and_Querying_with_OWL_Axioms.png

title: Integrating Taverna Player into Scratchpads
authors: Robert Haines
8422 Integrating_Taverna_Player_into_Scratchpads.png

title: Small Tools for Bioinformatics
authors: Pjotr Prins
8423 Small_Tools_for_Bioinformatics.png

title: SEEK for Science: A Data Management Platform which Supports Open and Reproducible Science
authors: Carole Goble
8424 SEEK_for_Science_A_Data_Management_Platform_which_Supports_Open_and_Reproducible_Science.png

title: Arvados: Achieving Computational Reproducibility and Data Provenance in Large-Scale Genomic Analyses
authors: Brett Smith
8425 Arvados_Achieving_Computational_Reproducibility_and_Data_Provenance_in_LargeScale_Genomic_Analyses.png

title: Enhancing the Galaxy Experience through Community Involvement
authors: Daniel Blankenberg
8426 Enhancing_the_Galaxy_Experience_through_Community_Involvement.png

title: Supporting Dynamic Community Developed Biological Pipelines
authors: Brad Chapman
8427 Supporting_Dynamic_Community_Developed_Biological_Pipelines.png

title: 'Open' as a Strategy for Durability, Reproducibility and Scalability
authors: Jonathan Rees
8428 Open_as_a_Strategy_for_Durability_Reproducibility_and_Scalability.png

title: Panel : Reproducibility: Rewards and Challenges
authors: Phil Bourne, Titus Brown, Varsha Khodiyar, Kaitlin Thaney
8429 Panel_Reproducibility_Rewards_and_Challenges.png